Publications

Title Authors Publication Year Type Cite
SAUNet: Shape Attentive U-Net for Interpretable Medical Image Segmentation. Jesse Sun, Fatemeh Darbeha, Mark Zaidi, Bo Wang. arXiv 2020 Preprint bib
Learning Global and Local Consistent Representations for Unsupervised Image Retrieval via Deep Graph Diffusion Networks. Zhiyong Dou, Haotian Cui, Bo Wang. arXiv 2020 Preprint bib
End-to-end Named Entity Recognition and Relation Extraction using Pre-trained Language Models. John Giorgi, Xindi Wang, Nicola Sahar, Won Young Shin, Gary D. Bader, Bo Wang. arXiv 2019 Preprint bib
Deep Differentiable Random Forests for Age Estimation. Wei Shen, Yilu Guo, Yan Wang, Kai Zhao, Bo Wang, Alan Yuille. IEEE Trans. Pattern Analysis and Machine Intelligence (TPAMI) 2019 Journal bib
To Embed or Not: Network Embedding as a Paradigm in Computational Biology. Walter Nelson, Marinka Zitnik, Bo Wang, Jure Leskovec, Anna Goldenberg, Roded Sharan. Frontiers in Genetics 2019 Journal bib
Machine learning for integrating data in biology and medicine: Principles, practice, and opportunities. M Zitnik, F Nguyen, B Wang, J Leskovec, A Goldenberg, MM Hoffman. Information Fusion 2019 Journal bib
Multi-omic tumor data reveal diversity of molecular mechanisms that correlate with survival. D Ramazzotti, A Lal, B Wang, S Batzoglou, A Sidow. Nature Communications 2018 Journal bib
Network Enhancement: a general method to denoise weighted biological networks. Bo Wang, Armin Pourshafeie, Marinka Zitnik, Junjie Zhu, Carlos D Bustamante, Serafim Batzoglou, Jure Leskovec. Nature Communications 2018 Journal bib
SIMLR: A Tool for Large‐Scale Genomic Analyses by Multi‐Kernel Learning. Bo Wang, Daniele Ramazzotti, Luca De Sano, Junjie Zhu, Emma Pierson, Serafim Batzoglou. Proteomics 2018 Journal bib
Vicus: Exploiting local structures to improve network-based analysis of biological data. Bo Wang, Lin Huang, Yuke Zhu, Anshul Kundaje, Serafim Batzoglou, Anna Goldenberg. PLoS Computational Biology 2017 Journal bib
Microbial typing by machine learned DNA melt signatures. Nadya Andini, Bo Wang Pornpat Athamanolap. et al. Scientific Reports 2017 Journal bib
Visualization and analysis of single-cell RNA-seq data by kernel-based similarity learning. Bo Wang, Junjie Zhu, Emma Pierson, Serafim Batzoglou. Nature Methods 2017 Journal bib
Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis. Solveig K Sieberts, Fan Zhu, [...] Bo Wang. et al. Nature Communications 2016 Journal bib
Reveel: large-scale population genotyping using low-coverage sequencing data. Lin Huang, Bo Wang, Ruitang Chen, Sivan Bercovici, Serafim Batzoglou. Bioinformatics 2015 Journal bib
Similarity network fusion for aggregating data types on a genomic scale. Bo Wang, Aziz M Mezlini, Feyyaz Demir, Marc Fiume, Zhuowen Tu, Michael Brudno, Benjamin Haibe-Kains, Anna Goldenberg. Nature Methods 2014 Journal bib
Parameter Estimation for ODEs Using a Cross-Entropy Approach. Bo Wang, Wayne Enright. SIAM Journal on Scientific Computing (SISC) 2013 Journal bib
Identifying cancer specific functionally relevant miRNAs from gene expression and miRNA-to-gene networks using regularized regression. Aziz M Mezlini, Bo Wang, Amit Deshwar, Quaid Morris, Anna Goldenberg. PloS One 2013 Journal bib
Face identification using reference-based features with message passing model. Wei Shen, Bo Wang, Yueming Wang, Xiang Bai, Longin Jan Latecki. Neurocomputing 2013 Journal bib
Co-transduction for shape retrieval. Xiang Bai, Bo Wang, Cong Yao, Wenyu Liu, Zhuowen Tu. IEEE Transactions on Image Processing (TIP) 2011 Journal bib
Effective Improved Graph Transduction. Jun Chen, Yu Zhou, Yajun Gao, Bo Wang, Lin-bo Luo, Wenyu Liu. JSW 2011 Journal bib
Diversity Transfer Network for Few-Shot Learning. Mengting Chen, Yuxin Fang, Xinggang Wang, Heng Luo, Yifeng Geng, Xinyu Zhang, Chang Huang, Wenyu Liu, Bo Wang. AAAI Conference on Artificial Intelligence (AAAI) 2020 Conference bib
Moment Matching for Multi-Source Domain Adaptation. Xingchao Peng, Qinxun Bai, Xide Xia, Zijun Huang, Kate Saenko, Bo Wang. International Conference on Computer Vision (ICCV) 2019 Conference bib
Deep co-training for semi-supervised image recognition. Siyuan Qiao, Wei Shen, Zhishuai Zhang, Bo Wang, Alan Yuille. European Conference on Computer Vision (ECCV) 2018 Conference bib
Single-shot object detection with enriched semantics. Zhishuai Zhang, Siyuan Qiao, Cihang Xie, Wei Shen, Bo Wang, Alan L Yuille. IEEE Conference on Computer Vision and Pattern Recognition (CVPR) 2018 Conference bib
Deep regression forests for age estimation.. Wei Shen, Yilu Guo, Yan Wang, Kai Zhao, Bo Wang, Alan L Yuille. IEEE Conference on Computer Vision and Pattern Recognition (CVPR) 2018 Conference bib
Gradually updated neural networks for large-scale image recognition. Siyuan Qiao, Zhishuai Zhang, Wei Shen, Bo Wang, Alan Yuille. International Conference on Machine Learning (ICML) 2018 Conference bib
Unsupervised learning from noisy networks with applications to Hi-C data. Bo Wang, Junjie Zhu, Armin Pourshafeie, Oana Ursu, Serafim Batzoglou, Anshul Kundaje. Advances in Neural Information Processing Systems (NIPS) 2016 Conference bib
Early Recurrence Improves Edge Detection. Xun Shi, Bo Wang, John K Tsotsos. Proceedings of the British Machine Vision Conference (BMVC) 2013 Conference bib
Dynamic Label Propagation for Semi-supervised Multi-class Multi-label Classification. . Bo Wang, Zhuowen Tu, John K Tsotsos. International Conference on Computer Vision (ICCV) 2013 Conference bib
Sparse Subspace Denoising for Image Manifolds. Bo Wang, Zhuowen Tu. IEEE Conference on Computer Vision and Pattern Recognition (CVPR) 2013 Conference bib
Affinity learning via self-diffusion for image segmentation and clustering. . Bo Wang, Zhuowen Tu. IEEE Conference on Computer Vision and Pattern Recognition (CVPR) 2012 Conference bib
Unsupervised metric fusion by cross diffusion. Bo Wang, Jiayan Jiang, Wei Wang, Zhi-Hua Zhou, Zhuowen Tu. IEEE Conference on Computer Vision and Pattern Recognition (CVPR) 2012 Conference bib
Unsupervised metric learning by self-smoothing operator. Jiayan Jiang, Bo Wang, Zhuowen Tu. International Conference on Computer Vision (ICCV) 2011 Conference bib
Shape classification using tree-unions. Bo Wang, Wei Shen, Wenyu Liu, Xinge You, Xiang Bai. International Conference on Pattern Recognition (ICPR) 2010 Conference bib
Object recognition using junctions. Bo Wang, Xiang Bai, Xinggang Wang, Wenyu Liu, Zhuowen Tu. European Conference on Computer Vision (ECCV) 2010 Conference bib
Rapid Shape Retrieval Using Improved Graph Transduction. Jun Chen, Yu Zhou, Bo Wang, Linbo Luo, Wenyu Liu. International Conference on Information Engineering and Computer Science 2009 Conference bib
Evolutionary game for distributed power allocation over cooperative relay networks. Jin Hu, Bo Wang, Jiao-long Wei, Shuang-lin Huang. International Conference on Wireless Communications, Networking and Mobile Computing (WiCOM) 2009 Conference bib
Skeleton graph matching based on critical points using path similarity. . Yao Xu, Bo Wang, Wenyu Liu, Xiang Bai. Asian Conference on Computer Vision (ACCV) 2009 Conference bib
Robust Face Detection via Learning Small Faces on Hard Images. Zhishuai Zhang, Wei Shen, Siyuan Qiao, Yan Wang, Bo Wang, Alan Yuille. arXiv 2018 Preprint bib
Deep learning for object saliency detection and image segmentation. Hengyue Pan, Bo Wang, Hui Jiang. arXiv 2015 Preprint bib
Gradient-based Laplacian Feature Selection. Bo Wang, Anna Goldenberg. arXiv 2014 Preprint bib

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